Publications: 2018 - 2017

D. M. Bianchi, J. R. Peterson, T. M. Earnest, M. J. Hallock, and Z. Luthey-Schulten
A Hybrid CME-ODE Method for Efficient Simulation of the Galactose Switch in Yeast
IET Systems Biology, 2018, doi:10.1049/iet-syb.2017.0070. In press.

M. C. R. Melo, R. C. Bernardi, T. Rudack, M. Scheurer,C. Riplinger, J. C. Phillips, J. D. C. Maia, G. B. Rocha, J. V. Ribeiro,
J. E. Stone, F. Neese, K. Schulten, and Z. Luthey-Schulten
NAMD goes quantum: An integrative suite for hybrid simulations
Nature Methods, 2018, online, doi:10.1038/nmeth.4638.

W. Ma, K. D. Whitley, Y. R. Chemla , Z. Luthey-Schulten, K. Schulten
Free energy simulations reveal molecular mechanism for functional switch of a DNA helicase
eLife, 2018, online, doi:10.7554/eLife.34186.

M. Breuer, T. M. Earnest, C. Merryman, K. S. Wise, L. Sun, M. R. Lynott, C. A. Hutchison III, H. O. Smith, J. D. Lapek Jr., D. J. Gonzalez,
V. de Crecy-Lagard, D. Haas, A. D. Hanson, P. Labhsetwar, J. I. Glass, Z. Luthey-Schulten
Essential Metabolism for a Minimal Cell
eLife, 2018, Submitted.

T. M. Earnest, J. A. Cole, and Z. Luthey-Schulten.
Simulating Biological Processes: Stochastic Physics from Whole Cells to Colonies
Reports on Progress in Physics, 2018, doi:10.1088/1361-6633/aaae2c